Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.24■□□□□ 0.35
PCK1P35558 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.24■□□□□ 0.35
PCK1P35558 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCK1P35558 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 ZNF259P1-201ENST00000407656 1365 ntBASIC17.24■□□□□ 0.35
PCK1P35558 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.24■□□□□ 0.35
PCK1P35558 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.24■□□□□ 0.35
PCK1P35558 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.24■□□□□ 0.35
PCK1P35558 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCK1P35558 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCK1P35558 BCAR1-209ENST00000546196 1340 ntBASIC17.23■□□□□ 0.35
PCK1P35558 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.23■□□□□ 0.35
PCK1P35558 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 KRT19P2-202ENST00000557173 1012 ntBASIC17.23■□□□□ 0.35
PCK1P35558 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.23■□□□□ 0.35
PCK1P35558 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.23■□□□□ 0.35
PCK1P35558 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCK1P35558 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCK1P35558 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCK1P35558 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.23■□□□□ 0.35
PCK1P35558 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCK1P35558 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.23■□□□□ 0.35
PCK1P35558 AL596087.1-201ENST00000400979 1969 ntBASIC17.22■□□□□ 0.35
PCK1P35558 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCK1P35558 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PCK1P35558 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.22■□□□□ 0.35
PCK1P35558 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PCK1P35558 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.22■□□□□ 0.35
PCK1P35558 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
PCK1P35558 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 AC026396.1-201ENST00000419388 421 ntBASIC17.22■□□□□ 0.35
PCK1P35558 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.22■□□□□ 0.35
PCK1P35558 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.22■□□□□ 0.35
PCK1P35558 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCK1P35558 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.22■□□□□ 0.35
PCK1P35558 AC106730.1-201ENST00000566722 1090 ntBASIC17.22■□□□□ 0.35
PCK1P35558 AC018845.2-201ENST00000568326 409 ntBASIC17.22■□□□□ 0.35
PCK1P35558 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PCK1P35558 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.22■□□□□ 0.35
PCK1P35558 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
PCK1P35558 REXO1L8P-201ENST00000604378 1897 ntBASIC17.22■□□□□ 0.35
PCK1P35558 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCK1P35558 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.22■□□□□ 0.35
PCK1P35558 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PCK1P35558 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.21■□□□□ 0.35
PCK1P35558 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCK1P35558 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCK1P35558 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.21■□□□□ 0.35
PCK1P35558 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCK1P35558 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
PCK1P35558 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms