Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 FGFR3P6-201ENST00000457012 610 ntBASIC15.91■□□□□ 0.14
EPHA3P29320 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHA3P29320 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHA3P29320 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.91■□□□□ 0.14
EPHA3P29320 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
EPHA3P29320 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA3P29320 AC006058.4-201ENST00000624016 1670 ntBASIC15.91■□□□□ 0.14
EPHA3P29320 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA3P29320 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
EPHA3P29320 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.91■□□□□ 0.14
EPHA3P29320 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA3P29320 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
EPHA3P29320 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA3P29320 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.91■□□□□ 0.14
EPHA3P29320 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA3P29320 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA3P29320 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHA3P29320 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
EPHA3P29320 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHA3P29320 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.91■□□□□ 0.14
EPHA3P29320 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.9■□□□□ 0.14
EPHA3P29320 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.9■□□□□ 0.14
EPHA3P29320 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
EPHA3P29320 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.9■□□□□ 0.14
EPHA3P29320 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
EPHA3P29320 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
EPHA3P29320 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
EPHA3P29320 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 ARMC10P1-201ENST00000313754 855 ntBASIC15.9■□□□□ 0.14
EPHA3P29320 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
EPHA3P29320 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.9■□□□□ 0.14
EPHA3P29320 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.9■□□□□ 0.14
EPHA3P29320 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.9■□□□□ 0.14
EPHA3P29320 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.9■□□□□ 0.14
EPHA3P29320 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.9■□□□□ 0.14
EPHA3P29320 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
EPHA3P29320 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
EPHA3P29320 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.9■□□□□ 0.14
EPHA3P29320 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
EPHA3P29320 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.9■□□□□ 0.14
EPHA3P29320 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.9■□□□□ 0.14
EPHA3P29320 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 AC129492.6-201ENST00000611383 1305 ntBASIC15.9■□□□□ 0.14
EPHA3P29320 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.9■□□□□ 0.14
EPHA3P29320 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.9■□□□□ 0.14
EPHA3P29320 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EPHA3P29320 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.9■□□□□ 0.14
EPHA3P29320 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
EPHA3P29320 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
EPHA3P29320 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.89■□□□□ 0.13
EPHA3P29320 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.89■□□□□ 0.13
EPHA3P29320 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.89■□□□□ 0.13
EPHA3P29320 AC025062.2-201ENST00000605477 670 ntBASIC15.89■□□□□ 0.13
EPHA3P29320 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.89■□□□□ 0.13
EPHA3P29320 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.89■□□□□ 0.13
EPHA3P29320 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.89■□□□□ 0.13
EPHA3P29320 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
EPHA3P29320 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
EPHA3P29320 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms