Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NFKB1P19838 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NFKB1P19838 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NFKB1P19838 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.58■□□□□ 0.25
NFKB1P19838 LINC02447-202ENST00000501888 2146 ntBASIC16.58■□□□□ 0.25
NFKB1P19838 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NFKB1P19838 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.58■□□□□ 0.25
NFKB1P19838 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NFKB1P19838 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.58■□□□□ 0.25
NFKB1P19838 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
NFKB1P19838 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NFKB1P19838 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.58■□□□□ 0.25
NFKB1P19838 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NFKB1P19838 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NFKB1P19838 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NFKB1P19838 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NFKB1P19838 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NFKB1P19838 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NFKB1P19838 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.58■□□□□ 0.24
NFKB1P19838 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.58■□□□□ 0.24
NFKB1P19838 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.58■□□□□ 0.24
NFKB1P19838 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.58■□□□□ 0.24
NFKB1P19838 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.58■□□□□ 0.24
NFKB1P19838 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.58■□□□□ 0.24
NFKB1P19838 MTDHP5-201ENST00000598980 586 ntBASIC16.58■□□□□ 0.24
NFKB1P19838 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
NFKB1P19838 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.58■□□□□ 0.24
NFKB1P19838 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NFKB1P19838 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NFKB1P19838 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NFKB1P19838 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NFKB1P19838 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NFKB1P19838 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NFKB1P19838 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NFKB1P19838 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NFKB1P19838 AC132872.4-202ENST00000622924 2756 ntBASIC16.58■□□□□ 0.24
NFKB1P19838 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NFKB1P19838 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NFKB1P19838 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.58■□□□□ 0.24
NFKB1P19838 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NFKB1P19838 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 PAUPAR-201ENST00000630360 2965 ntBASIC16.57■□□□□ 0.24
NFKB1P19838 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NFKB1P19838 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
NFKB1P19838 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 AC069224.1-201ENST00000566372 1715 ntBASIC16.57■□□□□ 0.24
NFKB1P19838 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.57■□□□□ 0.24
NFKB1P19838 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NFKB1P19838 FOXO1B-201ENST00000504678 1527 ntBASIC16.57■□□□□ 0.24
NFKB1P19838 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.57■□□□□ 0.24
NFKB1P19838 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.57■□□□□ 0.24
NFKB1P19838 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
NFKB1P19838 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NFKB1P19838 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.57■□□□□ 0.24
NFKB1P19838 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.57■□□□□ 0.24
NFKB1P19838 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
NFKB1P19838 AC027307.2-201ENST00000591252 911 ntBASIC16.57■□□□□ 0.24
NFKB1P19838 AC073389.1-201ENST00000595595 795 ntBASIC16.57■□□□□ 0.24
NFKB1P19838 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NFKB1P19838 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NFKB1P19838 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.57■□□□□ 0.24
NFKB1P19838 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NFKB1P19838 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NFKB1P19838 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NFKB1P19838 FER1L4-210ENST00000615531 5998 ntBASIC16.56■□□□□ 0.24
NFKB1P19838 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NFKB1P19838 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.56■□□□□ 0.24
NFKB1P19838 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.56■□□□□ 0.24
NFKB1P19838 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NFKB1P19838 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms