Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.78□□□□□ -0.04
FREM3P0C091 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.78□□□□□ -0.04
FREM3P0C091 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.78□□□□□ -0.04
FREM3P0C091 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.78□□□□□ -0.04
FREM3P0C091 AC024267.1-201ENST00000582320 895 ntBASIC14.78□□□□□ -0.04
FREM3P0C091 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.78□□□□□ -0.04
FREM3P0C091 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
FREM3P0C091 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.78□□□□□ -0.04
FREM3P0C091 KRT8P12-202ENST00000472924 1397 ntBASIC14.78□□□□□ -0.04
FREM3P0C091 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FREM3P0C091 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FREM3P0C091 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
FREM3P0C091 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FREM3P0C091 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FREM3P0C091 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.77□□□□□ -0.04
FREM3P0C091 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FREM3P0C091 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
FREM3P0C091 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.77□□□□□ -0.04
FREM3P0C091 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
FREM3P0C091 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.77□□□□□ -0.04
FREM3P0C091 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.77□□□□□ -0.04
FREM3P0C091 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.77□□□□□ -0.04
FREM3P0C091 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
FREM3P0C091 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FREM3P0C091 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FREM3P0C091 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FREM3P0C091 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
FREM3P0C091 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.77□□□□□ -0.05
FREM3P0C091 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.77□□□□□ -0.05
FREM3P0C091 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.77□□□□□ -0.05
FREM3P0C091 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.77□□□□□ -0.05
FREM3P0C091 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.77□□□□□ -0.05
FREM3P0C091 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
FREM3P0C091 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.77□□□□□ -0.05
FREM3P0C091 CICP6-201ENST00000457191 2729 ntBASIC14.77□□□□□ -0.05
FREM3P0C091 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
FREM3P0C091 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
FREM3P0C091 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.77□□□□□ -0.05
FREM3P0C091 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.77□□□□□ -0.05
FREM3P0C091 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.77□□□□□ -0.05
FREM3P0C091 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.77□□□□□ -0.05
FREM3P0C091 RN7SL204P-201ENST00000582831 262 ntBASIC14.77□□□□□ -0.05
FREM3P0C091 AL133215.2-201ENST00000609242 977 ntBASIC14.77□□□□□ -0.05
FREM3P0C091 AC007967.4-201ENST00000614700 386 ntBASIC14.77□□□□□ -0.05
FREM3P0C091 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.77□□□□□ -0.05
FREM3P0C091 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.77□□□□□ -0.05
FREM3P0C091 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FREM3P0C091 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
FREM3P0C091 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.76□□□□□ -0.05
FREM3P0C091 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
FREM3P0C091 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.76□□□□□ -0.05
FREM3P0C091 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.76□□□□□ -0.05
FREM3P0C091 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
FREM3P0C091 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.76□□□□□ -0.05
FREM3P0C091 TREML5P-201ENST00000421694 576 ntBASIC14.76□□□□□ -0.05
FREM3P0C091 FAM8A3P-201ENST00000427218 844 ntBASIC14.76□□□□□ -0.05
FREM3P0C091 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FREM3P0C091 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.76□□□□□ -0.05
FREM3P0C091 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.76□□□□□ -0.05
FREM3P0C091 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.76□□□□□ -0.05
FREM3P0C091 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.76□□□□□ -0.05
FREM3P0C091 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms