Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VTNP04004 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VTNP04004 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.77■□□□□ 0.44
VTNP04004 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VTNP04004 RN7SL692P-201ENST00000464677 288 ntBASIC17.77■□□□□ 0.44
VTNP04004 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VTNP04004 API5-211ENST00000534695 560 ntTSL 5 BASIC17.77■□□□□ 0.44
VTNP04004 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
VTNP04004 AL596325.1-201ENST00000563991 1082 ntBASIC17.77■□□□□ 0.44
VTNP04004 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.77■□□□□ 0.44
VTNP04004 MIR6069-201ENST00000620069 79 ntBASIC17.77■□□□□ 0.44
VTNP04004 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.77■□□□□ 0.44
VTNP04004 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.77■□□□□ 0.44
VTNP04004 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.77■□□□□ 0.44
VTNP04004 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VTNP04004 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
VTNP04004 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
VTNP04004 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
VTNP04004 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VTNP04004 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.77■□□□□ 0.43
VTNP04004 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
VTNP04004 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
VTNP04004 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
VTNP04004 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VTNP04004 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.76■□□□□ 0.43
VTNP04004 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.76■□□□□ 0.43
VTNP04004 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 AC063926.2-201ENST00000623766 1308 ntBASIC17.76■□□□□ 0.43
VTNP04004 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.76■□□□□ 0.43
VTNP04004 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.76■□□□□ 0.43
VTNP04004 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
VTNP04004 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
VTNP04004 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.76■□□□□ 0.43
VTNP04004 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.76■□□□□ 0.43
VTNP04004 AC114501.2-201ENST00000439631 535 ntBASIC17.76■□□□□ 0.43
VTNP04004 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.76■□□□□ 0.43
VTNP04004 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.76■□□□□ 0.43
VTNP04004 DOC2GP-202ENST00000514950 1163 ntBASIC17.76■□□□□ 0.43
VTNP04004 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.76■□□□□ 0.43
VTNP04004 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.76■□□□□ 0.43
VTNP04004 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.76■□□□□ 0.43
VTNP04004 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
VTNP04004 AC004461.2-201ENST00000629517 803 ntBASIC17.76■□□□□ 0.43
VTNP04004 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VTNP04004 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.76■□□□□ 0.43
VTNP04004 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.76■□□□□ 0.43
VTNP04004 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTNP04004 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VTNP04004 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.76■□□□□ 0.43
VTNP04004 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
VTNP04004 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.75■□□□□ 0.43
VTNP04004 GAPDHP21-201ENST00000450301 1010 ntBASIC17.75■□□□□ 0.43
VTNP04004 SDHAP3-202ENST00000515467 728 ntBASIC17.75■□□□□ 0.43
VTNP04004 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.75■□□□□ 0.43
VTNP04004 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VTNP04004 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VTNP04004 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
VTNP04004 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.75■□□□□ 0.43
VTNP04004 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.75■□□□□ 0.43
VTNP04004 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.75■□□□□ 0.43
VTNP04004 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.75■□□□□ 0.43
VTNP04004 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.75■□□□□ 0.43
VTNP04004 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VTNP04004 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms