Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TNFP01375 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.85■□□□□ 0.13
TNFP01375 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.85■□□□□ 0.13
TNFP01375 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.85■□□□□ 0.13
TNFP01375 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.85■□□□□ 0.13
TNFP01375 SDHAP3-202ENST00000515467 728 ntBASIC15.85■□□□□ 0.13
TNFP01375 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.85■□□□□ 0.13
TNFP01375 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.85■□□□□ 0.13
TNFP01375 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.85■□□□□ 0.13
TNFP01375 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.85■□□□□ 0.13
TNFP01375 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.85■□□□□ 0.13
TNFP01375 AL662799.1-202ENST00000614205 422 ntBASIC15.85■□□□□ 0.13
TNFP01375 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.85■□□□□ 0.13
TNFP01375 AL358472.5-202ENST00000641448 1267 ntBASIC15.85■□□□□ 0.13
TNFP01375 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFP01375 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFP01375 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNFP01375 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.85■□□□□ 0.13
TNFP01375 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFP01375 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.85■□□□□ 0.13
TNFP01375 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFP01375 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNFP01375 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TNFP01375 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.85■□□□□ 0.13
TNFP01375 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFP01375 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TNFP01375 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.84■□□□□ 0.13
TNFP01375 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFP01375 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TNFP01375 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
TNFP01375 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.84■□□□□ 0.13
TNFP01375 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.84■□□□□ 0.13
TNFP01375 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.84■□□□□ 0.13
TNFP01375 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFP01375 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.84■□□□□ 0.13
TNFP01375 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TNFP01375 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TNFP01375 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TNFP01375 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.84■□□□□ 0.13
TNFP01375 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TNFP01375 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNFP01375 AC007541.1-201ENST00000570282 1469 ntBASIC15.84■□□□□ 0.13
TNFP01375 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.84■□□□□ 0.13
TNFP01375 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.83■□□□□ 0.13
TNFP01375 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFP01375 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFP01375 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFP01375 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFP01375 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.83■□□□□ 0.13
TNFP01375 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFP01375 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
TNFP01375 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFP01375 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TNFP01375 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TNFP01375 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFP01375 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.83■□□□□ 0.12
TNFP01375 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFP01375 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFP01375 FO393414.2-201ENST00000405153 598 ntBASIC15.83■□□□□ 0.12
TNFP01375 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.83■□□□□ 0.12
TNFP01375 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.83■□□□□ 0.12
TNFP01375 AC005225.4-201ENST00000557330 545 ntBASIC15.83■□□□□ 0.12
TNFP01375 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFP01375 SPDYE22P-201ENST00000582158 798 ntBASIC15.83■□□□□ 0.12
TNFP01375 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.83■□□□□ 0.12
TNFP01375 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.83■□□□□ 0.12
TNFP01375 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFP01375 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TNFP01375 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.83■□□□□ 0.12
TNFP01375 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TNFP01375 AC063926.2-201ENST00000623766 1308 ntBASIC15.83■□□□□ 0.12
TNFP01375 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFP01375 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFP01375 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms