Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.31□□□□□ -0.44
LTAP01374 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.31□□□□□ -0.44
LTAP01374 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.31□□□□□ -0.44
LTAP01374 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.31□□□□□ -0.44
LTAP01374 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.31□□□□□ -0.44
LTAP01374 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
LTAP01374 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 ARMC10P1-201ENST00000313754 855 ntBASIC12.31□□□□□ -0.44
LTAP01374 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 HCG4-201ENST00000418983 998 ntBASIC12.31□□□□□ -0.44
LTAP01374 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 BX005266.1-201ENST00000473402 457 ntBASIC12.31□□□□□ -0.44
LTAP01374 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.31□□□□□ -0.44
LTAP01374 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.31□□□□□ -0.44
LTAP01374 TPSP2-201ENST00000561760 610 ntBASIC12.31□□□□□ -0.44
LTAP01374 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LTAP01374 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.31□□□□□ -0.44
LTAP01374 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 AL589182.2-201ENST00000619332 1049 ntBASIC12.31□□□□□ -0.44
LTAP01374 AL022326.1-202ENST00000641533 845 ntBASIC12.31□□□□□ -0.44
LTAP01374 AC007292.2-201ENST00000593524 1812 ntBASIC12.31□□□□□ -0.44
LTAP01374 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
LTAP01374 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.31□□□□□ -0.44
LTAP01374 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LTAP01374 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.31□□□□□ -0.44
LTAP01374 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 CICP13-201ENST00000422015 2789 ntBASIC12.31□□□□□ -0.44
LTAP01374 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.31□□□□□ -0.44
LTAP01374 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.31□□□□□ -0.44
LTAP01374 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.31□□□□□ -0.44
LTAP01374 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LTAP01374 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.31□□□□□ -0.44
LTAP01374 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
LTAP01374 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.3□□□□□ -0.44
LTAP01374 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.3□□□□□ -0.44
LTAP01374 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.3□□□□□ -0.44
LTAP01374 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 TCAF2P1-201ENST00000291129 2421 ntBASIC12.3□□□□□ -0.44
LTAP01374 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.3□□□□□ -0.44
LTAP01374 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.3□□□□□ -0.44
LTAP01374 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.3□□□□□ -0.44
LTAP01374 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 TOB2P1-201ENST00000469761 992 ntBASIC12.3□□□□□ -0.44
LTAP01374 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LTAP01374 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.3□□□□□ -0.44
LTAP01374 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.3□□□□□ -0.44
LTAP01374 AC005412.3-201ENST00000580309 715 ntBASIC12.3□□□□□ -0.44
LTAP01374 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.3□□□□□ -0.44
LTAP01374 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.3□□□□□ -0.44
LTAP01374 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.3□□□□□ -0.44
LTAP01374 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.3□□□□□ -0.44
LTAP01374 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
LTAP01374 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LTAP01374 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
LTAP01374 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LTAP01374 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
LTAP01374 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.29□□□□□ -0.44
LTAP01374 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.29□□□□□ -0.44
LTAP01374 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LTAP01374 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LTAP01374 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LTAP01374 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms