Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TOMM40O96008 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TOMM40O96008 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TOMM40O96008 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TOMM40O96008 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TOMM40O96008 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.84□□□□□ -0.35
TOMM40O96008 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.84□□□□□ -0.35
TOMM40O96008 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TOMM40O96008 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TOMM40O96008 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TOMM40O96008 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TOMM40O96008 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
TOMM40O96008 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TOMM40O96008 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TOMM40O96008 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.83□□□□□ -0.35
TOMM40O96008 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TOMM40O96008 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.83□□□□□ -0.35
TOMM40O96008 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TOMM40O96008 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.83□□□□□ -0.35
TOMM40O96008 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
TOMM40O96008 AL603832.2-201ENST00000566195 2125 ntBASIC12.83□□□□□ -0.35
TOMM40O96008 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TOMM40O96008 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TOMM40O96008 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TOMM40O96008 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.83□□□□□ -0.35
TOMM40O96008 AC012569.1-201ENST00000591191 1524 ntBASIC12.83□□□□□ -0.35
TOMM40O96008 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.83□□□□□ -0.36
TOMM40O96008 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.83□□□□□ -0.36
TOMM40O96008 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TOMM40O96008 REXO1L8P-201ENST00000604378 1897 ntBASIC12.83□□□□□ -0.36
TOMM40O96008 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.83□□□□□ -0.36
TOMM40O96008 DUSP5P1-201ENST00000441325 1139 ntBASIC12.83□□□□□ -0.36
TOMM40O96008 RNPS1P1-201ENST00000507437 918 ntBASIC12.83□□□□□ -0.36
TOMM40O96008 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.83□□□□□ -0.36
TOMM40O96008 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.83□□□□□ -0.36
TOMM40O96008 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.83□□□□□ -0.36
TOMM40O96008 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.83□□□□□ -0.36
TOMM40O96008 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TOMM40O96008 AC105339.3-201ENST00000560043 636 ntBASIC12.83□□□□□ -0.36
TOMM40O96008 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.83□□□□□ -0.36
TOMM40O96008 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
TOMM40O96008 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TOMM40O96008 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.83□□□□□ -0.36
TOMM40O96008 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 AL356488.2-201ENST00000602755 427 ntBASIC12.83□□□□□ -0.36
TOMM40O96008 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TOMM40O96008 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TOMM40O96008 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TOMM40O96008 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.83□□□□□ -0.36
TOMM40O96008 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
TOMM40O96008 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.83□□□□□ -0.36
TOMM40O96008 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TOMM40O96008 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.83□□□□□ -0.36
TOMM40O96008 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TOMM40O96008 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TOMM40O96008 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.83□□□□□ -0.36
TOMM40O96008 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TOMM40O96008 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.82□□□□□ -0.36
TOMM40O96008 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TOMM40O96008 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TOMM40O96008 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TOMM40O96008 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.82□□□□□ -0.36
TOMM40O96008 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 RPS2P28-201ENST00000314255 741 ntBASIC12.82□□□□□ -0.36
TOMM40O96008 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
TOMM40O96008 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.82□□□□□ -0.36
TOMM40O96008 CLEC4GP1-201ENST00000596555 870 ntBASIC12.82□□□□□ -0.36
TOMM40O96008 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.82□□□□□ -0.36
TOMM40O96008 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TOMM40O96008 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TOMM40O96008 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.82□□□□□ -0.36
TOMM40O96008 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TOMM40O96008 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms