Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VAPBO95292 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VAPBO95292 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VAPBO95292 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.42■□□□□ 0.22
VAPBO95292 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VAPBO95292 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
VAPBO95292 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.42■□□□□ 0.22
VAPBO95292 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.42■□□□□ 0.22
VAPBO95292 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.42■□□□□ 0.22
VAPBO95292 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.42■□□□□ 0.22
VAPBO95292 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.42■□□□□ 0.22
VAPBO95292 AL078644.1-201ENST00000609881 752 ntBASIC16.42■□□□□ 0.22
VAPBO95292 AC120114.3-201ENST00000611923 658 ntBASIC16.42■□□□□ 0.22
VAPBO95292 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
VAPBO95292 BX640515.1-201ENST00000617215 977 ntBASIC16.42■□□□□ 0.22
VAPBO95292 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.42■□□□□ 0.22
VAPBO95292 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VAPBO95292 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VAPBO95292 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.42■□□□□ 0.22
VAPBO95292 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VAPBO95292 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.42■□□□□ 0.22
VAPBO95292 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.42■□□□□ 0.22
VAPBO95292 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.42■□□□□ 0.22
VAPBO95292 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VAPBO95292 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.41■□□□□ 0.22
VAPBO95292 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.41■□□□□ 0.22
VAPBO95292 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.41■□□□□ 0.22
VAPBO95292 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.41■□□□□ 0.22
VAPBO95292 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.41■□□□□ 0.22
VAPBO95292 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.41■□□□□ 0.22
VAPBO95292 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VAPBO95292 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.41■□□□□ 0.22
VAPBO95292 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.41■□□□□ 0.22
VAPBO95292 AC093724.1-201ENST00000448659 1027 ntBASIC16.41■□□□□ 0.22
VAPBO95292 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.41■□□□□ 0.22
VAPBO95292 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.41■□□□□ 0.22
VAPBO95292 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.41■□□□□ 0.22
VAPBO95292 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.41■□□□□ 0.22
VAPBO95292 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.41■□□□□ 0.22
VAPBO95292 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VAPBO95292 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.41■□□□□ 0.22
VAPBO95292 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.41■□□□□ 0.22
VAPBO95292 AL513190.1-201ENST00000621254 727 ntBASIC16.41■□□□□ 0.22
VAPBO95292 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 AL513477.1-201ENST00000602865 2407 ntBASIC16.41■□□□□ 0.22
VAPBO95292 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.41■□□□□ 0.22
VAPBO95292 CDC14C-201ENST00000428251 1719 ntBASIC16.41■□□□□ 0.22
VAPBO95292 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VAPBO95292 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.41■□□□□ 0.22
VAPBO95292 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.41■□□□□ 0.22
VAPBO95292 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.41■□□□□ 0.22
VAPBO95292 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.41■□□□□ 0.22
VAPBO95292 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.41■□□□□ 0.22
VAPBO95292 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VAPBO95292 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VAPBO95292 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VAPBO95292 LINC02447-202ENST00000501888 2146 ntBASIC16.4■□□□□ 0.22
VAPBO95292 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.4■□□□□ 0.22
VAPBO95292 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VAPBO95292 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.4■□□□□ 0.22
VAPBO95292 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.4■□□□□ 0.22
VAPBO95292 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms