Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLSTN1O94985 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.14■□□□□ 0.49
CLSTN1O94985 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.14■□□□□ 0.49
CLSTN1O94985 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLSTN1O94985 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.14■□□□□ 0.49
CLSTN1O94985 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLSTN1O94985 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLSTN1O94985 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLSTN1O94985 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLSTN1O94985 AC012569.1-201ENST00000591191 1524 ntBASIC18.13■□□□□ 0.49
CLSTN1O94985 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CLSTN1O94985 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.13■□□□□ 0.49
CLSTN1O94985 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CLSTN1O94985 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CLSTN1O94985 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLSTN1O94985 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLSTN1O94985 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLSTN1O94985 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.13■□□□□ 0.49
CLSTN1O94985 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLSTN1O94985 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.13■□□□□ 0.49
CLSTN1O94985 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLSTN1O94985 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLSTN1O94985 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.13■□□□□ 0.49
CLSTN1O94985 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.13■□□□□ 0.49
CLSTN1O94985 AC091167.2-201ENST00000579581 588 ntBASIC18.13■□□□□ 0.49
CLSTN1O94985 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.13■□□□□ 0.49
CLSTN1O94985 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CLSTN1O94985 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLSTN1O94985 AC004877.2-201ENST00000623941 599 ntBASIC18.13■□□□□ 0.49
CLSTN1O94985 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLSTN1O94985 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.13■□□□□ 0.49
CLSTN1O94985 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CLSTN1O94985 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLSTN1O94985 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLSTN1O94985 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.13■□□□□ 0.49
CLSTN1O94985 AC092171.3-201ENST00000610122 2651 ntBASIC18.13■□□□□ 0.49
CLSTN1O94985 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
CLSTN1O94985 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLSTN1O94985 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CLSTN1O94985 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLSTN1O94985 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 AL645728.1-201ENST00000366221 2101 ntBASIC18.12■□□□□ 0.49
CLSTN1O94985 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.12■□□□□ 0.49
CLSTN1O94985 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.12■□□□□ 0.49
CLSTN1O94985 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.12■□□□□ 0.49
CLSTN1O94985 DUX4L17-201ENST00000557360 1267 ntBASIC18.12■□□□□ 0.49
CLSTN1O94985 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 ACTL9-202ENST00000612068 1252 ntBASIC18.12■□□□□ 0.49
CLSTN1O94985 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.12■□□□□ 0.49
CLSTN1O94985 FAM197Y3-203ENST00000618346 717 ntBASIC18.12■□□□□ 0.49
CLSTN1O94985 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CLSTN1O94985 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC18.12■□□□□ 0.49
CLSTN1O94985 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLSTN1O94985 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLSTN1O94985 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLSTN1O94985 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLSTN1O94985 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLSTN1O94985 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLSTN1O94985 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CLSTN1O94985 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CLSTN1O94985 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CLSTN1O94985 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLSTN1O94985 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
CLSTN1O94985 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.11■□□□□ 0.49
CLSTN1O94985 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CLSTN1O94985 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLSTN1O94985 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.11■□□□□ 0.49
CLSTN1O94985 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.11■□□□□ 0.49
CLSTN1O94985 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLSTN1O94985 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 AC025580.3-201ENST00000617932 1424 ntBASIC18.11■□□□□ 0.49
CLSTN1O94985 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLSTN1O94985 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms