Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 DGCR9-201ENST00000609630 2415 ntBASIC14.18□□□□□ -0.14
CCNKO75909 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.18□□□□□ -0.14
CCNKO75909 NUDT16P1-203ENST00000513809 620 ntBASIC14.18□□□□□ -0.14
CCNKO75909 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.18□□□□□ -0.14
CCNKO75909 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.18□□□□□ -0.14
CCNKO75909 KRT18P6-201ENST00000555540 1265 ntBASIC14.18□□□□□ -0.14
CCNKO75909 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.18□□□□□ -0.14
CCNKO75909 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.18□□□□□ -0.14
CCNKO75909 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCNKO75909 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.18□□□□□ -0.14
CCNKO75909 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCNKO75909 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.18□□□□□ -0.14
CCNKO75909 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.18□□□□□ -0.14
CCNKO75909 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNKO75909 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCNKO75909 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNKO75909 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CCNKO75909 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCNKO75909 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CCNKO75909 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCNKO75909 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNKO75909 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 AL356585.2-201ENST00000625078 2396 ntBASIC14.17□□□□□ -0.14
CCNKO75909 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCNKO75909 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 REXO1L8P-201ENST00000604378 1897 ntBASIC14.17□□□□□ -0.14
CCNKO75909 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.17□□□□□ -0.14
CCNKO75909 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.17□□□□□ -0.14
CCNKO75909 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.17□□□□□ -0.14
CCNKO75909 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
CCNKO75909 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCNKO75909 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.17□□□□□ -0.14
CCNKO75909 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNKO75909 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.17□□□□□ -0.14
CCNKO75909 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNKO75909 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCNKO75909 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNKO75909 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNKO75909 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCNKO75909 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CCNKO75909 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCNKO75909 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.17□□□□□ -0.14
CCNKO75909 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.16□□□□□ -0.14
CCNKO75909 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.16□□□□□ -0.14
CCNKO75909 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCNKO75909 KRT18P65-201ENST00000439811 1286 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms