Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
GPC4O75487 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
GPC4O75487 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 ME2P1-201ENST00000426028 1970 ntBASIC16.41■□□□□ 0.22
GPC4O75487 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
GPC4O75487 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 AP000347.1-202ENST00000435868 847 ntBASIC16.41■□□□□ 0.22
GPC4O75487 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
GPC4O75487 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.41■□□□□ 0.22
GPC4O75487 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.41■□□□□ 0.22
GPC4O75487 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.41■□□□□ 0.22
GPC4O75487 KRT18P58-201ENST00000527480 1120 ntBASIC16.41■□□□□ 0.22
GPC4O75487 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.41■□□□□ 0.22
GPC4O75487 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.41■□□□□ 0.22
GPC4O75487 KRT19P2-202ENST00000557173 1012 ntBASIC16.41■□□□□ 0.22
GPC4O75487 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 AC025580.3-201ENST00000617932 1424 ntBASIC16.41■□□□□ 0.22
GPC4O75487 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.41■□□□□ 0.22
GPC4O75487 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.41■□□□□ 0.22
GPC4O75487 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
GPC4O75487 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 BCAR1-209ENST00000546196 1340 ntBASIC16.41■□□□□ 0.22
GPC4O75487 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
GPC4O75487 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.41■□□□□ 0.22
GPC4O75487 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GPC4O75487 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.41■□□□□ 0.22
GPC4O75487 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC4O75487 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GPC4O75487 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.4■□□□□ 0.22
GPC4O75487 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.4■□□□□ 0.22
GPC4O75487 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.4■□□□□ 0.22
GPC4O75487 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GPC4O75487 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC4O75487 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.4■□□□□ 0.22
GPC4O75487 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.4■□□□□ 0.22
GPC4O75487 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC4O75487 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC4O75487 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC4O75487 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.4■□□□□ 0.22
GPC4O75487 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.4■□□□□ 0.22
GPC4O75487 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.4■□□□□ 0.22
GPC4O75487 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC4O75487 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GPC4O75487 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.4■□□□□ 0.22
GPC4O75487 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GPC4O75487 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GPC4O75487 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
GPC4O75487 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
GPC4O75487 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
GPC4O75487 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.39■□□□□ 0.21
GPC4O75487 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.39■□□□□ 0.21
GPC4O75487 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
GPC4O75487 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.39■□□□□ 0.21
GPC4O75487 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC4O75487 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms