Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHMP2AO43633 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CHMP2AO43633 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CHMP2AO43633 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 TREML5P-201ENST00000421694 576 ntBASIC18.32■□□□□ 0.52
CHMP2AO43633 AL353705.2-201ENST00000428243 662 ntBASIC18.32■□□□□ 0.52
CHMP2AO43633 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.32■□□□□ 0.52
CHMP2AO43633 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP2AO43633 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP2AO43633 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP2AO43633 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP2AO43633 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CHMP2AO43633 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHMP2AO43633 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP2AO43633 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CHMP2AO43633 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHMP2AO43633 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHMP2AO43633 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CHMP2AO43633 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 FO538757.1-201ENST00000623083 1397 ntBASIC18.31■□□□□ 0.52
CHMP2AO43633 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP2AO43633 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CHMP2AO43633 HMGN1P19-201ENST00000436976 333 ntBASIC18.31■□□□□ 0.52
CHMP2AO43633 MTND6P24-201ENST00000440466 518 ntBASIC18.31■□□□□ 0.52
CHMP2AO43633 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 IGHV3-42-201ENST00000520410 361 ntBASIC18.31■□□□□ 0.52
CHMP2AO43633 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.31■□□□□ 0.52
CHMP2AO43633 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHMP2AO43633 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP2AO43633 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHMP2AO43633 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP2AO43633 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP2AO43633 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CHMP2AO43633 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP2AO43633 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CHMP2AO43633 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CHMP2AO43633 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CHMP2AO43633 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP2AO43633 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP2AO43633 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP2AO43633 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHMP2AO43633 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP2AO43633 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
CHMP2AO43633 AC061975.2-201ENST00000581722 295 ntBASIC18.3■□□□□ 0.52
CHMP2AO43633 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP2AO43633 AC024267.1-201ENST00000582320 895 ntBASIC18.3■□□□□ 0.52
CHMP2AO43633 AC005498.2-205ENST00000593218 784 ntBASIC18.3■□□□□ 0.52
CHMP2AO43633 AL390955.2-201ENST00000603032 514 ntBASIC18.3■□□□□ 0.52
CHMP2AO43633 AC007967.4-201ENST00000614700 386 ntBASIC18.3■□□□□ 0.52
CHMP2AO43633 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP2AO43633 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP2AO43633 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP2AO43633 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP2AO43633 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.3■□□□□ 0.52
CHMP2AO43633 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHMP2AO43633 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CHMP2AO43633 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHMP2AO43633 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP2AO43633 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CHMP2AO43633 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP2AO43633 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms