Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNQ3O43525 AC004987.2-201ENST00000395959 1148 ntBASIC20.71■□□□□ 0.91
KCNQ3O43525 AP006294.1-201ENST00000415407 339 ntBASIC20.71■□□□□ 0.91
KCNQ3O43525 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KCNQ3O43525 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNQ3O43525 GIMAP3P-201ENST00000495150 836 ntBASIC20.71■□□□□ 0.91
KCNQ3O43525 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNQ3O43525 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
KCNQ3O43525 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.71■□□□□ 0.91
KCNQ3O43525 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNQ3O43525 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNQ3O43525 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNQ3O43525 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
KCNQ3O43525 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNQ3O43525 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KCNQ3O43525 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNQ3O43525 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNQ3O43525 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNQ3O43525 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KCNQ3O43525 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
KCNQ3O43525 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
KCNQ3O43525 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNQ3O43525 KRT8P37-201ENST00000451609 1420 ntBASIC20.7■□□□□ 0.9
KCNQ3O43525 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNQ3O43525 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.7■□□□□ 0.9
KCNQ3O43525 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNQ3O43525 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
KCNQ3O43525 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNQ3O43525 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KCNQ3O43525 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
KCNQ3O43525 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNQ3O43525 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.7■□□□□ 0.9
KCNQ3O43525 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.7■□□□□ 0.9
KCNQ3O43525 ARSEP1-201ENST00000420443 635 ntBASIC20.7■□□□□ 0.9
KCNQ3O43525 AC007274.1-201ENST00000439805 662 ntBASIC20.7■□□□□ 0.9
KCNQ3O43525 RN7SL837P-201ENST00000463010 287 ntBASIC20.7■□□□□ 0.9
KCNQ3O43525 HILS1-202ENST00000545329 423 ntBASIC20.7■□□□□ 0.9
KCNQ3O43525 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNQ3O43525 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.7■□□□□ 0.9
KCNQ3O43525 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.7■□□□□ 0.9
KCNQ3O43525 AL391069.4-201ENST00000609583 481 ntBASIC20.7■□□□□ 0.9
KCNQ3O43525 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.7■□□□□ 0.9
KCNQ3O43525 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNQ3O43525 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.7■□□□□ 0.9
KCNQ3O43525 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KCNQ3O43525 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KCNQ3O43525 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNQ3O43525 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KCNQ3O43525 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNQ3O43525 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KCNQ3O43525 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KCNQ3O43525 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KCNQ3O43525 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.7■□□□□ 0.9
KCNQ3O43525 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KCNQ3O43525 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.69■□□□□ 0.9
KCNQ3O43525 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KCNQ3O43525 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNQ3O43525 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KCNQ3O43525 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 AC134407.2-201ENST00000625089 1978 ntBASIC20.69■□□□□ 0.9
KCNQ3O43525 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KCNQ3O43525 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KCNQ3O43525 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KCNQ3O43525 AC079776.1-201ENST00000401540 1152 ntBASIC20.69■□□□□ 0.9
KCNQ3O43525 AL512384.1-201ENST00000406683 331 ntBASIC20.69■□□□□ 0.9
KCNQ3O43525 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.69■□□□□ 0.9
KCNQ3O43525 KRT18P64-201ENST00000434946 1219 ntBASIC20.69■□□□□ 0.9
KCNQ3O43525 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.69■□□□□ 0.9
KCNQ3O43525 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.69■□□□□ 0.9
KCNQ3O43525 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNQ3O43525 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.69■□□□□ 0.9
KCNQ3O43525 AC099568.2-201ENST00000609194 695 ntBASIC20.69■□□□□ 0.9
KCNQ3O43525 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNQ3O43525 NKILA-202ENST00000614771 2598 ntBASIC20.69■□□□□ 0.9
KCNQ3O43525 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.69■□□□□ 0.9
KCNQ3O43525 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNQ3O43525 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.69■□□□□ 0.9
KCNQ3O43525 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNQ3O43525 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.68■□□□□ 0.9
KCNQ3O43525 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNQ3O43525 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNQ3O43525 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
KCNQ3O43525 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
KCNQ3O43525 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms