Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HOXA2O43364 KRT8P37-201ENST00000451609 1420 ntBASIC17.3■□□□□ 0.36
HOXA2O43364 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXA2O43364 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXA2O43364 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HOXA2O43364 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HOXA2O43364 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 AC098850.1-201ENST00000419919 790 ntBASIC17.3■□□□□ 0.36
HOXA2O43364 AC112492.5-201ENST00000421897 457 ntBASIC17.3■□□□□ 0.36
HOXA2O43364 HLA-V-201ENST00000429037 534 ntBASIC17.3■□□□□ 0.36
HOXA2O43364 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXA2O43364 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXA2O43364 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXA2O43364 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.3■□□□□ 0.36
HOXA2O43364 AL033527.5-201ENST00000641382 801 ntBASIC17.3■□□□□ 0.36
HOXA2O43364 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXA2O43364 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXA2O43364 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXA2O43364 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXA2O43364 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA2O43364 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA2O43364 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA2O43364 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA2O43364 AP001094.4-201ENST00000579008 2176 ntBASIC17.29■□□□□ 0.36
HOXA2O43364 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HOXA2O43364 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 AL645608.8-201ENST00000606034 2086 ntBASIC17.29■□□□□ 0.36
HOXA2O43364 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA2O43364 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA2O43364 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HOXA2O43364 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 AC092552.1-201ENST00000547243 906 ntBASIC17.29■□□□□ 0.36
HOXA2O43364 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXA2O43364 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HOXA2O43364 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HOXA2O43364 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HOXA2O43364 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXA2O43364 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA2O43364 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA2O43364 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXA2O43364 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA2O43364 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA2O43364 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HOXA2O43364 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HOXA2O43364 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXA2O43364 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HOXA2O43364 MIR1909-201ENST00000411312 80 ntBASIC17.28■□□□□ 0.36
HOXA2O43364 AC234783.1-201ENST00000441761 496 ntBASIC17.28■□□□□ 0.36
HOXA2O43364 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.28■□□□□ 0.36
HOXA2O43364 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXA2O43364 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HOXA2O43364 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXA2O43364 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HOXA2O43364 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
HOXA2O43364 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXA2O43364 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXA2O43364 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HOXA2O43364 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXA2O43364 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HOXA2O43364 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA2O43364 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA2O43364 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA2O43364 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXA2O43364 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXA2O43364 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXA2O43364 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms