Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.17□□□□□ -0.14
PHF1O43189 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
PHF1O43189 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PHF1O43189 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PHF1O43189 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF1O43189 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF1O43189 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PHF1O43189 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF1O43189 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 AC087163.2-201ENST00000457299 853 ntBASIC14.17□□□□□ -0.14
PHF1O43189 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.17□□□□□ -0.14
PHF1O43189 PDPK2P-202ENST00000562415 1191 ntBASIC14.17□□□□□ -0.14
PHF1O43189 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF1O43189 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.17□□□□□ -0.14
PHF1O43189 AJ011932.1-201ENST00000621707 465 ntBASIC14.17□□□□□ -0.14
PHF1O43189 Z92544.3-201ENST00000624747 417 ntBASIC14.17□□□□□ -0.14
PHF1O43189 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF1O43189 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF1O43189 PAUPAR-201ENST00000630360 2965 ntBASIC14.17□□□□□ -0.14
PHF1O43189 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF1O43189 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF1O43189 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.17□□□□□ -0.14
PHF1O43189 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 AL596257.1-201ENST00000641463 2694 ntBASIC14.17□□□□□ -0.14
PHF1O43189 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.17□□□□□ -0.14
PHF1O43189 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 BCAR1-209ENST00000546196 1340 ntBASIC14.16□□□□□ -0.14
PHF1O43189 HLA-A-202ENST00000376806 1854 ntBASIC14.16□□□□□ -0.14
PHF1O43189 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.16□□□□□ -0.14
PHF1O43189 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.16□□□□□ -0.14
PHF1O43189 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PHF1O43189 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
PHF1O43189 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
PHF1O43189 SLC25A6P2-201ENST00000497974 877 ntBASIC14.16□□□□□ -0.14
PHF1O43189 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.16□□□□□ -0.14
PHF1O43189 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PHF1O43189 AC004877.2-201ENST00000623941 599 ntBASIC14.16□□□□□ -0.14
PHF1O43189 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.16□□□□□ -0.14
PHF1O43189 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.16□□□□□ -0.14
PHF1O43189 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
PHF1O43189 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF1O43189 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
PHF1O43189 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PHF1O43189 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
PHF1O43189 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms