Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ABCC4O15439 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ABCC4O15439 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
ABCC4O15439 HLA-H-201ENST00000383620 1096 ntBASIC20.61■□□□□ 0.89
ABCC4O15439 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.61■□□□□ 0.89
ABCC4O15439 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.61■□□□□ 0.89
ABCC4O15439 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.61■□□□□ 0.89
ABCC4O15439 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.61■□□□□ 0.89
ABCC4O15439 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.61■□□□□ 0.89
ABCC4O15439 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.61■□□□□ 0.89
ABCC4O15439 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.61■□□□□ 0.89
ABCC4O15439 AC069224.1-201ENST00000566372 1715 ntBASIC20.61■□□□□ 0.89
ABCC4O15439 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.61■□□□□ 0.89
ABCC4O15439 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.61■□□□□ 0.89
ABCC4O15439 AL662799.1-202ENST00000614205 422 ntBASIC20.61■□□□□ 0.89
ABCC4O15439 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.61■□□□□ 0.89
ABCC4O15439 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ABCC4O15439 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 AC018695.7-201ENST00000624587 2492 ntBASIC20.61■□□□□ 0.89
ABCC4O15439 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.61■□□□□ 0.89
ABCC4O15439 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ABCC4O15439 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.6■□□□□ 0.89
ABCC4O15439 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCC4O15439 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCC4O15439 PCDHA1-201ENST00000378133 2726 ntBASIC20.6■□□□□ 0.89
ABCC4O15439 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.6■□□□□ 0.89
ABCC4O15439 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ABCC4O15439 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCC4O15439 PIN1P1-201ENST00000412108 996 ntBASIC20.6■□□□□ 0.89
ABCC4O15439 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.6■□□□□ 0.89
ABCC4O15439 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.6■□□□□ 0.89
ABCC4O15439 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
ABCC4O15439 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ABCC4O15439 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.6■□□□□ 0.89
ABCC4O15439 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCC4O15439 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCC4O15439 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.6■□□□□ 0.89
ABCC4O15439 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCC4O15439 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ABCC4O15439 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.6■□□□□ 0.89
ABCC4O15439 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
ABCC4O15439 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCC4O15439 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCC4O15439 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.59■□□□□ 0.89
ABCC4O15439 SPTLC1P1-201ENST00000447199 261 ntBASIC20.59■□□□□ 0.89
ABCC4O15439 HLA-V-204ENST00000476601 1289 ntBASIC20.59■□□□□ 0.89
ABCC4O15439 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.59■□□□□ 0.89
ABCC4O15439 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.59■□□□□ 0.89
ABCC4O15439 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.59■□□□□ 0.89
ABCC4O15439 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.59■□□□□ 0.89
ABCC4O15439 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.59■□□□□ 0.89
ABCC4O15439 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.59■□□□□ 0.89
ABCC4O15439 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ABCC4O15439 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.59■□□□□ 0.89
ABCC4O15439 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ABCC4O15439 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.59■□□□□ 0.89
ABCC4O15439 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.59■□□□□ 0.89
ABCC4O15439 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ABCC4O15439 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ABCC4O15439 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ABCC4O15439 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ABCC4O15439 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.58■□□□□ 0.89
ABCC4O15439 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.58■□□□□ 0.89
ABCC4O15439 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ABCC4O15439 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.58■□□□□ 0.89
ABCC4O15439 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.58■□□□□ 0.89
ABCC4O15439 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
ABCC4O15439 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ABCC4O15439 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ABCC4O15439 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ABCC4O15439 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ABCC4O15439 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ABCC4O15439 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ABCC4O15439 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ABCC4O15439 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ABCC4O15439 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.58■□□□□ 0.88
ABCC4O15439 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ABCC4O15439 CDC14C-201ENST00000428251 1719 ntBASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms