Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SEMA3EO15041 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SEMA3EO15041 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEMA3EO15041 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SEMA3EO15041 AP001282.1-201ENST00000531301 1499 ntBASIC19.48■□□□□ 0.71
SEMA3EO15041 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.48■□□□□ 0.71
SEMA3EO15041 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3EO15041 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SEMA3EO15041 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
SEMA3EO15041 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
SEMA3EO15041 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.48■□□□□ 0.71
SEMA3EO15041 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.48■□□□□ 0.71
SEMA3EO15041 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.48■□□□□ 0.71
SEMA3EO15041 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3EO15041 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 RN7SL692P-201ENST00000464677 288 ntBASIC19.48■□□□□ 0.71
SEMA3EO15041 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3EO15041 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3EO15041 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3EO15041 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.48■□□□□ 0.71
SEMA3EO15041 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.48■□□□□ 0.71
SEMA3EO15041 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3EO15041 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 AC099568.2-201ENST00000609194 695 ntBASIC19.48■□□□□ 0.71
SEMA3EO15041 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.48■□□□□ 0.71
SEMA3EO15041 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.48■□□□□ 0.71
SEMA3EO15041 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SEMA3EO15041 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SEMA3EO15041 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SEMA3EO15041 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SEMA3EO15041 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 AC092171.3-201ENST00000610122 2651 ntBASIC19.48■□□□□ 0.71
SEMA3EO15041 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEMA3EO15041 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.47■□□□□ 0.71
SEMA3EO15041 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SEMA3EO15041 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 SLC7A15P-201ENST00000424028 1363 ntBASIC19.47■□□□□ 0.71
SEMA3EO15041 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.47■□□□□ 0.71
SEMA3EO15041 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.47■□□□□ 0.71
SEMA3EO15041 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.47■□□□□ 0.71
SEMA3EO15041 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.47■□□□□ 0.71
SEMA3EO15041 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.47■□□□□ 0.71
SEMA3EO15041 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.47■□□□□ 0.71
SEMA3EO15041 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.47■□□□□ 0.71
SEMA3EO15041 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.47■□□□□ 0.71
SEMA3EO15041 AC055876.2-201ENST00000531834 546 ntBASIC19.47■□□□□ 0.71
SEMA3EO15041 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.47■□□□□ 0.71
SEMA3EO15041 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SEMA3EO15041 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
SEMA3EO15041 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
SEMA3EO15041 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 AC005052.1-201ENST00000625181 2492 ntBASIC19.47■□□□□ 0.71
SEMA3EO15041 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.47■□□□□ 0.71
SEMA3EO15041 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEMA3EO15041 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3EO15041 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.46■□□□□ 0.71
SEMA3EO15041 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SEMA3EO15041 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
SEMA3EO15041 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3EO15041 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3EO15041 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3EO15041 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3EO15041 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3EO15041 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SEMA3EO15041 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3EO15041 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.46■□□□□ 0.71
SEMA3EO15041 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SEMA3EO15041 COX5BP8-201ENST00000416911 349 ntBASIC19.46■□□□□ 0.71
SEMA3EO15041 NME2P1-201ENST00000426182 414 ntBASIC19.46■□□□□ 0.71
SEMA3EO15041 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.46■□□□□ 0.71
SEMA3EO15041 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.46■□□□□ 0.71
SEMA3EO15041 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.46■□□□□ 0.71
SEMA3EO15041 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC19.46■□□□□ 0.71
SEMA3EO15041 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.46■□□□□ 0.71
SEMA3EO15041 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SEMA3EO15041 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.46■□□□□ 0.71
SEMA3EO15041 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEMA3EO15041 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.46■□□□□ 0.71
SEMA3EO15041 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms