Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.51■□□□□ 0.23
AP3B1O00203 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP3B1O00203 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.5■□□□□ 0.23
AP3B1O00203 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
AP3B1O00203 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 AC016027.1-202ENST00000607927 1699 ntBASIC16.5■□□□□ 0.23
AP3B1O00203 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.5■□□□□ 0.23
AP3B1O00203 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.5■□□□□ 0.23
AP3B1O00203 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.5■□□□□ 0.23
AP3B1O00203 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 AC074386.1-202ENST00000463561 864 ntBASIC16.5■□□□□ 0.23
AP3B1O00203 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 AC112191.1-201ENST00000523689 701 ntBASIC16.5■□□□□ 0.23
AP3B1O00203 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.5■□□□□ 0.23
AP3B1O00203 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 AC068137.2-201ENST00000605408 478 ntBASIC16.5■□□□□ 0.23
AP3B1O00203 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.5■□□□□ 0.23
AP3B1O00203 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
AP3B1O00203 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AP3B1O00203 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3B1O00203 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3B1O00203 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.5■□□□□ 0.23
AP3B1O00203 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.49■□□□□ 0.23
AP3B1O00203 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3B1O00203 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3B1O00203 AC073439.1-201ENST00000624121 1774 ntBASIC16.49■□□□□ 0.23
AP3B1O00203 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
AP3B1O00203 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
AP3B1O00203 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
AP3B1O00203 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.49■□□□□ 0.23
AP3B1O00203 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3B1O00203 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.49■□□□□ 0.23
AP3B1O00203 PDPK2P-202ENST00000562415 1191 ntBASIC16.49■□□□□ 0.23
AP3B1O00203 AC002347.1-201ENST00000569543 541 ntBASIC16.49■□□□□ 0.23
AP3B1O00203 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3B1O00203 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3B1O00203 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3B1O00203 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.49■□□□□ 0.23
AP3B1O00203 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
AP3B1O00203 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
AP3B1O00203 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
AP3B1O00203 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3B1O00203 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 AP005117.1-202ENST00000581724 1908 ntBASIC16.49■□□□□ 0.23
AP3B1O00203 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3B1O00203 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
AP3B1O00203 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
AP3B1O00203 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
AP3B1O00203 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 AC008677.1-201ENST00000519230 1561 ntBASIC16.48■□□□□ 0.23
AP3B1O00203 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3B1O00203 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms