Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 MST1L-201ENST00000442552 2185 ntBASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM49D1C9J1S8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 SAPCD2P3-201ENST00000455031 850 ntBASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 AF238378.1-201ENST00000526806 358 ntBASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 AC008677.1-201ENST00000519230 1561 ntBASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM49D1C9J1S8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 RPS2P1-201ENST00000434010 821 ntBASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 HCG4P8-203ENST00000443049 980 ntBASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 IGHV3-65-201ENST00000523210 341 ntBASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 OR7E14P-202ENST00000530490 1290 ntBASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRIM49D1C9J1S8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms