Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AL512356.2-201ENST00000546955 174 ntBASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AC093520.2-201ENST00000561830 333 ntBASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AC004449.1-201ENST00000564240 433 ntBASIC11.63□□□□□ -0.55
LYRM9A8MSI8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AC027612.4-201ENST00000605371 583 ntBASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 LINC00628-201ENST00000628516 1289 ntBASIC11.63□□□□□ -0.55
LYRM9A8MSI8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LYRM9A8MSI8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 AP3S2-216ENST00000617003 1561 ntBASIC11.62□□□□□ -0.55
LYRM9A8MSI8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 MIR648-201ENST00000385046 94 ntBASIC11.62□□□□□ -0.55
LYRM9A8MSI8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 FAM58DP-201ENST00000428076 619 ntBASIC11.62□□□□□ -0.55
LYRM9A8MSI8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 CNN2P2-201ENST00000443536 909 ntBASIC11.62□□□□□ -0.55
LYRM9A8MSI8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 CNN2P3-201ENST00000450201 906 ntBASIC11.62□□□□□ -0.55
LYRM9A8MSI8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 HLA-J-203ENST00000494367 1087 ntBASIC11.62□□□□□ -0.55
LYRM9A8MSI8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 AC018529.1-201ENST00000613063 361 ntBASIC11.62□□□□□ -0.55
LYRM9A8MSI8 AL136317.3-201ENST00000618497 906 ntBASIC11.62□□□□□ -0.55
LYRM9A8MSI8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC11.62□□□□□ -0.55
LYRM9A8MSI8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms