Protein–RNA interactions for Protein: A6NJU9

NPIPB13, Nuclear pore complex-interacting protein family member B13, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB13A6NJU9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 AC004987.2-201ENST00000395959 1148 ntBASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 HTR5BP-201ENST00000430851 1154 ntBASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 POLD2P1-201ENST00000511220 997 ntBASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 KRT8P48-201ENST00000515599 1220 ntBASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 AL691432.1-201ENST00000596308 1422 ntBASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NPIPB13A6NJU9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 ELL2P1-201ENST00000413990 1906 ntBASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 EEF1DP4-201ENST00000446006 880 ntBASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 YBX1P5-201ENST00000509441 847 ntBASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 IGHV3-62-201ENST00000520057 340 ntBASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 AL671883.3-201ENST00000603274 991 ntBASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPB13A6NJU9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.36□□□□□ -0.11
NPIPB13A6NJU9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB13A6NJU9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB13A6NJU9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPB13A6NJU9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB13A6NJU9 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.36□□□□□ -0.11
NPIPB13A6NJU9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB13A6NJU9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.36□□□□□ -0.11
NPIPB13A6NJU9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB13A6NJU9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB13A6NJU9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms