Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 AC109635.5-201ENST00000533593 962 ntBASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 RPSAP43-201ENST00000402237 625 ntBASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 MKNK2P1-201ENST00000437526 628 ntBASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 AC021097.1-201ENST00000607902 574 ntBASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 AC069224.1-201ENST00000566372 1715 ntBASIC15.29■□□□□ 0.04
PRAMEF25A6NGN4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 MIR1233-2-201ENST00000408138 82 ntBASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 MIR1233-1-201ENST00000408722 82 ntBASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 AC005829.1-201ENST00000570002 483 ntBASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF25A6NGN4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF25A6NGN4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PRAMEF25A6NGN4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF25A6NGN4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms