Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 PKD1P1-201ENST00000458669 6805 ntBASIC14.21□□□□□ -0.13
MBD3L3A6NE82 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 DGCR5-201ENST00000399539 862 ntBASIC14.21□□□□□ -0.13
MBD3L3A6NE82 AP006294.1-201ENST00000415407 339 ntBASIC14.21□□□□□ -0.13
MBD3L3A6NE82 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 KRT17P7-201ENST00000451704 1104 ntBASIC14.21□□□□□ -0.13
MBD3L3A6NE82 AL589987.1-201ENST00000453380 819 ntBASIC14.21□□□□□ -0.13
MBD3L3A6NE82 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 RRP7BP-205ENST00000566851 833 ntBASIC14.21□□□□□ -0.13
MBD3L3A6NE82 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 AC007431.3-201ENST00000623221 587 ntBASIC14.21□□□□□ -0.13
MBD3L3A6NE82 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.21□□□□□ -0.13
MBD3L3A6NE82 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
MBD3L3A6NE82 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
MBD3L3A6NE82 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.21□□□□□ -0.14
MBD3L3A6NE82 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MBD3L3A6NE82 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MBD3L3A6NE82 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MBD3L3A6NE82 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 AP001282.1-201ENST00000531301 1499 ntBASIC14.2□□□□□ -0.14
MBD3L3A6NE82 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 AC080080.1-201ENST00000625121 2420 ntBASIC14.2□□□□□ -0.14
MBD3L3A6NE82 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 AC244107.1-201ENST00000442033 332 ntBASIC14.2□□□□□ -0.14
MBD3L3A6NE82 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 AC008494.3-201ENST00000606615 944 ntBASIC14.2□□□□□ -0.14
MBD3L3A6NE82 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 FLJ38576-201ENST00000623820 2459 ntBASIC14.2□□□□□ -0.14
MBD3L3A6NE82 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L3A6NE82 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L3A6NE82 ALOX12P2-203ENST00000570921 1945 ntBASIC14.19□□□□□ -0.14
MBD3L3A6NE82 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms