Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL590787.1-201ENST00000568856 1315 ntBASIC17.76■□□□□ 0.43
CCDC66A2RUB6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 PRYP5-201ENST00000451909 266 ntBASIC17.76■□□□□ 0.43
CCDC66A2RUB6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 AL353135.1-201ENST00000606729 504 ntBASIC17.76■□□□□ 0.43
CCDC66A2RUB6 AC069148.1-201ENST00000608741 768 ntBASIC17.76■□□□□ 0.43
CCDC66A2RUB6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 AL139011.1-202ENST00000642063 584 ntBASIC17.76■□□□□ 0.43
CCDC66A2RUB6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 AC243591.1-201ENST00000452967 1364 ntBASIC17.76■□□□□ 0.43
CCDC66A2RUB6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 NUS1P2-201ENST00000417358 873 ntBASIC17.75■□□□□ 0.43
CCDC66A2RUB6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 TERC-201ENST00000602385 541 ntBASIC17.75■□□□□ 0.43
CCDC66A2RUB6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC66A2RUB6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 ALOX12P2-203ENST00000570921 1945 ntBASIC17.74■□□□□ 0.43
CCDC66A2RUB6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 AP005117.1-201ENST00000584346 1413 ntBASIC17.74■□□□□ 0.43
CCDC66A2RUB6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC66A2RUB6 UPK3BP1-201ENST00000428678 509 ntBASIC17.74■□□□□ 0.43
CCDC66A2RUB6 ATP5G2P1-201ENST00000433580 426 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms