Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 AC068137.2-201ENST00000605408 478 ntBASIC18.61■□□□□ 0.57
CLIC4Q9Y696 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC4Q9Y696 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 AC140113.2-201ENST00000604370 208 ntBASIC18.6■□□□□ 0.57
CLIC4Q9Y696 AC099522.2-201ENST00000607001 744 ntBASIC18.6■□□□□ 0.57
CLIC4Q9Y696 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLIC4Q9Y696 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 WASH6P-202ENST00000359512 1437 ntBASIC18.59■□□□□ 0.57
CLIC4Q9Y696 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 AC106730.1-201ENST00000566722 1090 ntBASIC18.59■□□□□ 0.57
CLIC4Q9Y696 AL138918.1-201ENST00000568306 659 ntBASIC18.59■□□□□ 0.57
CLIC4Q9Y696 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 AC002347.1-201ENST00000569543 541 ntBASIC18.59■□□□□ 0.57
CLIC4Q9Y696 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 BX640515.1-201ENST00000617215 977 ntBASIC18.59■□□□□ 0.57
CLIC4Q9Y696 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC4Q9Y696 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms