Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 AC008735.3-201ENST00000596646 500 ntBASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 MIR6775-201ENST00000617557 69 ntBASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGA1Q9Y5H4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 AC008894.3-201ENST00000624324 3103 ntBASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 BTNL10-201ENST00000595971 695 ntBASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGA1Q9Y5H4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGA1Q9Y5H4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA1Q9Y5H4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA1Q9Y5H4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA1Q9Y5H4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA1Q9Y5H4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGA1Q9Y5H4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms