Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 HCG4-201ENST00000418983 998 ntBASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 PRSS29P-201ENST00000440800 595 ntBASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 FAM185BP-201ENST00000443595 716 ntBASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 UNC93B6-202ENST00000528242 690 ntBASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 AL662844.1-201ENST00000546340 181 ntBASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.35□□□□□ -0.11
RHBDD3Q9Y3P4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.34□□□□□ -0.11
RHBDD3Q9Y3P4 ACTL9-202ENST00000612068 1252 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms