Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.17■□□□□ 0.34
CDH9Q9ULB4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.17■□□□□ 0.34
CDH9Q9ULB4 FAM8A3P-201ENST00000427218 844 ntBASIC17.17■□□□□ 0.34
CDH9Q9ULB4 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.17■□□□□ 0.34
CDH9Q9ULB4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 AC004890.2-204ENST00000481968 304 ntBASIC17.17■□□□□ 0.34
CDH9Q9ULB4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 AC092364.2-202ENST00000597012 1073 ntBASIC17.17■□□□□ 0.34
CDH9Q9ULB4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 KRT8P12-202ENST00000472924 1397 ntBASIC17.16■□□□□ 0.34
CDH9Q9ULB4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 AC087499.5-201ENST00000452760 1342 ntBASIC17.16■□□□□ 0.34
CDH9Q9ULB4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH9Q9ULB4 AC006449.6-201ENST00000612330 2296 ntBASIC17.16■□□□□ 0.34
CDH9Q9ULB4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 AL136982.4-201ENST00000437689 1740 ntBASIC17.15■□□□□ 0.34
CDH9Q9ULB4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 CYP4F24P-201ENST00000586049 1580 ntBASIC17.15■□□□□ 0.34
CDH9Q9ULB4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH9Q9ULB4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDH9Q9ULB4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CDH9Q9ULB4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CDH9Q9ULB4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CDH9Q9ULB4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms