Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 AC092364.2-201ENST00000596710 2692 ntBASIC13.85□□□□□ -0.19
CLN8Q9UBY8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 WASH6P-202ENST00000359512 1437 ntBASIC13.85□□□□□ -0.19
CLN8Q9UBY8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 TFAMP1-201ENST00000412727 736 ntBASIC13.85□□□□□ -0.19
CLN8Q9UBY8 AC092474.2-201ENST00000424288 719 ntBASIC13.85□□□□□ -0.19
CLN8Q9UBY8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 AL135744.1-201ENST00000565098 629 ntBASIC13.85□□□□□ -0.19
CLN8Q9UBY8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 CYP2T1P-202ENST00000641596 2535 ntBASIC13.85□□□□□ -0.19
CLN8Q9UBY8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLN8Q9UBY8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 AC132872.4-202ENST00000622924 2756 ntBASIC13.84□□□□□ -0.19
CLN8Q9UBY8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 KRT8P39-201ENST00000396270 1433 ntBASIC13.84□□□□□ -0.19
CLN8Q9UBY8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 AL513210.1-201ENST00000629608 234 ntBASIC13.84□□□□□ -0.19
CLN8Q9UBY8 AC105339.1-204ENST00000636249 355 ntBASIC13.84□□□□□ -0.19
CLN8Q9UBY8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.84□□□□□ -0.19
CLN8Q9UBY8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.84□□□□□ -0.19
CLN8Q9UBY8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.83□□□□□ -0.19
CLN8Q9UBY8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.83□□□□□ -0.19
CLN8Q9UBY8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CLN8Q9UBY8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLN8Q9UBY8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLN8Q9UBY8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLN8Q9UBY8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CLN8Q9UBY8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms