Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VPS29Q9UBQ0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
VPS29Q9UBQ0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS29Q9UBQ0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS29Q9UBQ0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS29Q9UBQ0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS29Q9UBQ0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS29Q9UBQ0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS29Q9UBQ0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 AL162727.3-201ENST00000635661 2787 ntBASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 AC074386.1-202ENST00000463561 864 ntBASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 AC068137.2-201ENST00000605408 478 ntBASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 BX640515.1-201ENST00000617215 977 ntBASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 WASH6P-202ENST00000359512 1437 ntBASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VPS29Q9UBQ0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 AC105917.1-201ENST00000506637 2539 ntBASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 AC073439.1-201ENST00000624121 1774 ntBASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 AL591424.1-201ENST00000442569 1213 ntBASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 RNA5SP416-201ENST00000516838 111 ntBASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 PDPK2P-202ENST00000562415 1191 ntBASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS29Q9UBQ0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
VPS29Q9UBQ0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
VPS29Q9UBQ0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.64■□□□□ 0.09
VPS29Q9UBQ0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS29Q9UBQ0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS29Q9UBQ0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS29Q9UBQ0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms