Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
BLOC1S4Q9NUP1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 RARRES2P9-201ENST00000565168 469 ntBASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 AC024267.1-201ENST00000582320 895 ntBASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 AC004835.2-201ENST00000603762 682 ntBASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
BLOC1S4Q9NUP1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 AC254562.1-201ENST00000417586 456 ntBASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 KRT18P32-201ENST00000424695 1287 ntBASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 AC004967.1-201ENST00000453589 447 ntBASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 ALG1L8P-201ENST00000533887 760 ntBASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 AC027612.4-201ENST00000605371 583 ntBASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 AC009093.7-201ENST00000623853 1223 ntBASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.07■□□□□ 0.48
BLOC1S4Q9NUP1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 SPDYE14P-201ENST00000442619 822 ntBASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 AC134407.2-201ENST00000625089 1978 ntBASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.06■□□□□ 0.48
BLOC1S4Q9NUP1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms