Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 SPCS2P4-201ENST00000436160 681 ntBASIC15.02■□□□□ -0
SDHAF3Q9NRP4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.02■□□□□ -0
SDHAF3Q9NRP4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.02■□□□□ -0
SDHAF3Q9NRP4 AC093724.1-201ENST00000448659 1027 ntBASIC15.02■□□□□ -0
SDHAF3Q9NRP4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.02■□□□□ -0
SDHAF3Q9NRP4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.02■□□□□ -0
SDHAF3Q9NRP4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.02■□□□□ -0
SDHAF3Q9NRP4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.02■□□□□ -0
SDHAF3Q9NRP4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.02■□□□□ -0
SDHAF3Q9NRP4 AC073389.1-201ENST00000595595 795 ntBASIC15.02■□□□□ -0
SDHAF3Q9NRP4 AC022145.2-201ENST00000598203 171 ntBASIC15.02■□□□□ -0
SDHAF3Q9NRP4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.02■□□□□ -0
SDHAF3Q9NRP4 AC055717.3-201ENST00000622967 595 ntBASIC15.02■□□□□ -0
SDHAF3Q9NRP4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SDHAF3Q9NRP4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 AL136379.1-201ENST00000623471 2642 ntBASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CNN2P11-201ENST00000429351 262 ntBASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 AC098859.1-201ENST00000502915 1238 ntBASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SDHAF3Q9NRP4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 AC092171.3-201ENST00000610122 2651 ntBASIC15□□□□□ -0.01
SDHAF3Q9NRP4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15□□□□□ -0.01
SDHAF3Q9NRP4 AC004461.1-201ENST00000412461 403 ntBASIC15□□□□□ -0.01
SDHAF3Q9NRP4 RPS8P6-201ENST00000426177 609 ntBASIC15□□□□□ -0.01
SDHAF3Q9NRP4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms