Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 RNU1-129P-201ENST00000384064 167 ntBASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 U1.21-201ENST00000580816 167 ntBASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 AL031055.1-201ENST00000606362 631 ntBASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 AC092902.6-201ENST00000641783 218 ntBASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 MIR1233-2-201ENST00000408138 82 ntBASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 MIR1233-1-201ENST00000408722 82 ntBASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 MKNK2P1-201ENST00000437526 628 ntBASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 AC112191.1-201ENST00000523689 701 ntBASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 AL009183.1-201ENST00000603760 355 ntBASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 AC126177.1-201ENST00000547829 2218 ntBASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 AC079328.2-201ENST00000561241 3354 ntBASIC15.69■□□□□ 0.1
NECTIN3Q9NQS3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 AC002056.1-201ENST00000395613 760 ntBASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms