Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 RN7SL828P-201ENST00000607615 303 ntBASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 DOC2GP-204ENST00000639052 2548 ntBASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TM9SF3Q9HD45 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AL603756.1-201ENST00000606511 2163 ntBASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AC087499.5-201ENST00000452760 1342 ntBASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 NME2P1-201ENST00000426182 414 ntBASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 RNA5SP410-201ENST00000516285 106 ntBASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 AC092053.1-201ENST00000605787 1936 ntBASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF3Q9HD45 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 RPL37AP1-201ENST00000412502 279 ntBASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 AC009407.1-201ENST00000568958 598 ntBASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 AC105021.1-202ENST00000570572 669 ntBASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 AC008738.7-201ENST00000609744 511 ntBASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.3■□□□□ 0.2
TM9SF3Q9HD45 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms