Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 HTR7P1-202ENST00000624664 4411 ntBASIC14.85□□□□□ -0.03
CHD8Q9HCK8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.85□□□□□ -0.03
CHD8Q9HCK8 AC135050.7-201ENST00000624508 2218 ntBASIC14.85□□□□□ -0.03
CHD8Q9HCK8 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 JPT2-203ENST00000382711 894 ntTSL 4 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 AL157792.1-201ENST00000488281 530 ntBASIC14.84□□□□□ -0.03
CHD8Q9HCK8 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.84□□□□□ -0.03
CHD8Q9HCK8 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHD8Q9HCK8 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CHD8Q9HCK8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms