Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 HYMAI-201ENST00000635591 3347 ntBASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 AC009947.1-201ENST00000444350 727 ntBASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 UNC93B6-202ENST00000528242 690 ntBASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 AC116407.3-201ENST00000623905 1129 ntBASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRTM1Q9HBL6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 AC093909.1-201ENST00000504731 1122 ntBASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 AC104692.2-201ENST00000603054 253 ntBASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 AC092919.2-201ENST00000623631 1645 ntBASIC15.72■□□□□ 0.11
LRTM1Q9HBL6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 PRAL-201ENST00000624952 3286 ntBASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms