Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC68Q9H2F9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC68Q9H2F9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC68Q9H2F9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 HCG4B-203ENST00000450128 991 ntBASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 MIR3909-201ENST00000579518 119 ntBASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
CCDC68Q9H2F9 AC008741.2-201ENST00000612792 3115 ntBASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 IGLL3P-201ENST00000412472 434 ntBASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 AC023141.13-201ENST00000604991 943 ntBASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 AC010507.1-201ENST00000633895 436 ntBASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 AC026691.1-201ENST00000602502 2017 ntBASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC68Q9H2F9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC68Q9H2F9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms