Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
POLR2J3Q9H1A7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
POLR2J3Q9H1A7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
POLR2J3Q9H1A7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
POLR2J3Q9H1A7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
POLR2J3Q9H1A7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
POLR2J3Q9H1A7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 PRAL-201ENST00000624952 3286 ntBASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 AC068418.2-201ENST00000577309 3703 ntBASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 AC018712.1-201ENST00000455767 687 ntBASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 AF186996.4-201ENST00000467186 377 ntBASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 TP73-AS1-207ENST00000624167 988 ntBASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 LINC02447-202ENST00000501888 2146 ntBASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 CDC14C-201ENST00000428251 1719 ntBASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
POLR2J3Q9H1A7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 AC144831.1-201ENST00000573312 2656 ntBASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 AL592424.1-201ENST00000563624 1536 ntBASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PMS2P4-201ENST00000412466 1052 ntBASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PRSS29P-201ENST00000440800 595 ntBASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 FAM185BP-201ENST00000443595 716 ntBASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 AL645728.2-201ENST00000641974 660 ntBASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
POLR2J3Q9H1A7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms