Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.28□□□□□ -0.28
NKX6-2Q9C056 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 EGFEM1P-202ENST00000431685 1563 ntBASIC13.28□□□□□ -0.28
NKX6-2Q9C056 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX6-2Q9C056 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX6-2Q9C056 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 ABHD17AP1-201ENST00000358206 933 ntBASIC13.27□□□□□ -0.29
NKX6-2Q9C056 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 AC097374.2-201ENST00000618617 1306 ntBASIC13.27□□□□□ -0.29
NKX6-2Q9C056 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 AC002310.6-201ENST00000624451 1377 ntBASIC13.27□□□□□ -0.29
NKX6-2Q9C056 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX6-2Q9C056 AC027612.1-201ENST00000445234 2395 ntBASIC13.27□□□□□ -0.29
NKX6-2Q9C056 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
NKX6-2Q9C056 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms