Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
TRIM2Q9C040 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.06■□□□□ 0
TRIM2Q9C040 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM2Q9C040 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
TRIM2Q9C040 U82695.1-201ENST00000635752 1889 ntBASIC15.06■□□□□ 0
TRIM2Q9C040 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 LINC02199-201ENST00000506655 2702 ntBASIC15.06■□□□□ 0
TRIM2Q9C040 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.06■□□□□ 0
TRIM2Q9C040 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.06■□□□□ 0
TRIM2Q9C040 AL365203.3-201ENST00000609742 2057 ntBASIC15.06■□□□□ 0
TRIM2Q9C040 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.06■□□□□ 0
TRIM2Q9C040 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRIM2Q9C040 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRIM2Q9C040 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.06■□□□□ 0
TRIM2Q9C040 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
TRIM2Q9C040 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.06■□□□□ 0
TRIM2Q9C040 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.06■□□□□ 0
TRIM2Q9C040 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 AC023141.13-201ENST00000604991 943 ntBASIC15.06■□□□□ 0
TRIM2Q9C040 AC010507.1-201ENST00000633895 436 ntBASIC15.06■□□□□ 0
TRIM2Q9C040 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
TRIM2Q9C040 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.06■□□□□ 0
TRIM2Q9C040 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 AL592424.1-201ENST00000563624 1536 ntBASIC15.06■□□□□ 0
TRIM2Q9C040 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM2Q9C040 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRIM2Q9C040 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.06■□□□□ 0
TRIM2Q9C040 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRIM2Q9C040 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRIM2Q9C040 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM2Q9C040 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
TRIM2Q9C040 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM2Q9C040 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM2Q9C040 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRIM2Q9C040 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM2Q9C040 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM2Q9C040 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.05■□□□□ -0
TRIM2Q9C040 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.05■□□□□ -0
TRIM2Q9C040 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.05■□□□□ -0
TRIM2Q9C040 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.05■□□□□ -0
TRIM2Q9C040 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.05■□□□□ -0
TRIM2Q9C040 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.05■□□□□ -0
TRIM2Q9C040 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.05■□□□□ -0
TRIM2Q9C040 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.05■□□□□ -0
TRIM2Q9C040 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.05■□□□□ -0
TRIM2Q9C040 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 AC109635.5-201ENST00000533593 962 ntBASIC15.05■□□□□ -0
TRIM2Q9C040 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.05■□□□□ -0
TRIM2Q9C040 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.05■□□□□ -0
TRIM2Q9C040 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.05■□□□□ -0
TRIM2Q9C040 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.05■□□□□ -0
TRIM2Q9C040 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.05■□□□□ -0
TRIM2Q9C040 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.05■□□□□ -0
TRIM2Q9C040 NORAD-201ENST00000565493 5339 ntBASIC15.05■□□□□ -0
TRIM2Q9C040 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRIM2Q9C040 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
TRIM2Q9C040 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRIM2Q9C040 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.05■□□□□ -0
TRIM2Q9C040 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.05■□□□□ -0
TRIM2Q9C040 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM2Q9C040 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.04■□□□□ -0
TRIM2Q9C040 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.04■□□□□ -0
TRIM2Q9C040 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.04■□□□□ -0
TRIM2Q9C040 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms