Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 AC026396.1-201ENST00000419388 421 ntBASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 AC074386.1-202ENST00000463561 864 ntBASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 TNRC18P2-201ENST00000417666 2714 ntBASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 AC011477.6-201ENST00000604980 1927 ntBASIC14.94□□□□□ -0.02
RSPO3Q9BXY4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 PRYP6-201ENST00000514804 343 ntBASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 AC073389.1-201ENST00000595595 795 ntBASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 AC068137.2-201ENST00000605408 478 ntBASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.93□□□□□ -0.02
RSPO3Q9BXY4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 AC105250.1-201ENST00000509378 2057 ntBASIC14.92□□□□□ -0.02
RSPO3Q9BXY4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms