Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPAP1Q9BWH6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 AL590560.3-201ENST00000623350 461 ntBASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 PCGF3-213ENST00000620529 1899 ntBASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPAP1Q9BWH6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 AC022144.1-201ENST00000602255 1580 ntBASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 AL138828.2-201ENST00000615812 383 ntBASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 AC008894.3-201ENST00000624324 3103 ntBASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPAP1Q9BWH6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 FAM220BP-201ENST00000377689 816 ntBASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPAP1Q9BWH6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms