Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 AC067863.1-201ENST00000494933 530 ntBASIC16.8■□□□□ 0.28
RPRD1AQ96P16 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPRD1AQ96P16 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.79■□□□□ 0.28
RPRD1AQ96P16 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AL353705.2-201ENST00000428243 662 ntBASIC16.79■□□□□ 0.28
RPRD1AQ96P16 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AC125807.1-201ENST00000483097 614 ntBASIC16.79■□□□□ 0.28
RPRD1AQ96P16 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AC015911.4-201ENST00000588022 1070 ntBASIC16.79■□□□□ 0.28
RPRD1AQ96P16 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AL365330.1-201ENST00000607459 531 ntBASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 AL592424.1-201ENST00000563624 1536 ntBASIC16.79■□□□□ 0.28
RPRD1AQ96P16 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPRD1AQ96P16 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.78■□□□□ 0.28
RPRD1AQ96P16 KLF2P3-201ENST00000451977 1087 ntBASIC16.78■□□□□ 0.28
RPRD1AQ96P16 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms