Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRIM11Q96F44 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM11Q96F44 AC073439.1-201ENST00000624121 1774 ntBASIC17.28■□□□□ 0.36
TRIM11Q96F44 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM11Q96F44 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM11Q96F44 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM11Q96F44 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 IL9RP2-201ENST00000423948 1312 ntBASIC17.27■□□□□ 0.36
TRIM11Q96F44 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM11Q96F44 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM11Q96F44 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM11Q96F44 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM11Q96F44 HAUS4P1-201ENST00000406739 1145 ntBASIC17.27■□□□□ 0.36
TRIM11Q96F44 AC007967.2-201ENST00000432613 625 ntBASIC17.27■□□□□ 0.36
TRIM11Q96F44 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM11Q96F44 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRIM11Q96F44 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRIM11Q96F44 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM11Q96F44 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM11Q96F44 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM11Q96F44 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM11Q96F44 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TRIM11Q96F44 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM11Q96F44 AC046158.3-201ENST00000624947 2558 ntBASIC17.27■□□□□ 0.35
TRIM11Q96F44 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM11Q96F44 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM11Q96F44 AC068418.2-201ENST00000577309 3703 ntBASIC17.26■□□□□ 0.35
TRIM11Q96F44 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 PMS2P7-201ENST00000506558 1336 ntBASIC17.26■□□□□ 0.35
TRIM11Q96F44 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 AP005117.1-202ENST00000581724 1908 ntBASIC17.26■□□□□ 0.35
TRIM11Q96F44 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 AL591424.1-201ENST00000442569 1213 ntBASIC17.26■□□□□ 0.35
TRIM11Q96F44 AC074386.1-202ENST00000463561 864 ntBASIC17.26■□□□□ 0.35
TRIM11Q96F44 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 PRYP6-201ENST00000514804 343 ntBASIC17.26■□□□□ 0.35
TRIM11Q96F44 RNA5SP416-201ENST00000516838 111 ntBASIC17.26■□□□□ 0.35
TRIM11Q96F44 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM11Q96F44 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM11Q96F44 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 AC105917.1-201ENST00000506637 2539 ntBASIC17.25■□□□□ 0.35
TRIM11Q96F44 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRIM11Q96F44 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM11Q96F44 AC008677.1-201ENST00000519230 1561 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms