Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AC073439.1-201ENST00000624121 1774 ntBASIC16.82■□□□□ 0.28
HDAC11Q96DB2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 RARRES2P8-201ENST00000566335 367 ntBASIC16.82■□□□□ 0.28
HDAC11Q96DB2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.82■□□□□ 0.28
HDAC11Q96DB2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 AP000347.1-202ENST00000435868 847 ntBASIC16.81■□□□□ 0.28
HDAC11Q96DB2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDAC11Q96DB2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 AKAP8P1-201ENST00000434743 1349 ntBASIC16.8■□□□□ 0.28
HDAC11Q96DB2 PMS2P7-201ENST00000506558 1336 ntBASIC16.8■□□□□ 0.28
HDAC11Q96DB2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 AL355306.1-201ENST00000415580 579 ntBASIC16.8■□□□□ 0.28
HDAC11Q96DB2 FAM58CP-201ENST00000435741 640 ntBASIC16.8■□□□□ 0.28
HDAC11Q96DB2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.8■□□□□ 0.28
HDAC11Q96DB2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 GPALPP1-207ENST00000611650 899 ntBASIC16.8■□□□□ 0.28
HDAC11Q96DB2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDAC11Q96DB2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms