Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 LINC00895-201ENST00000629028 1637 ntBASIC14.53□□□□□ -0.08
RFT1Q96AA3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 AL732292.2-201ENST00000609649 430 ntBASIC14.53□□□□□ -0.08
RFT1Q96AA3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.53□□□□□ -0.08
RFT1Q96AA3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFT1Q96AA3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFT1Q96AA3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFT1Q96AA3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.52□□□□□ -0.08
RFT1Q96AA3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RFT1Q96AA3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.52□□□□□ -0.08
RFT1Q96AA3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RFT1Q96AA3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.52□□□□□ -0.08
RFT1Q96AA3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.52□□□□□ -0.08
RFT1Q96AA3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFT1Q96AA3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFT1Q96AA3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFT1Q96AA3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFT1Q96AA3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RFT1Q96AA3 AP005117.1-201ENST00000584346 1413 ntBASIC14.52□□□□□ -0.08
RFT1Q96AA3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFT1Q96AA3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFT1Q96AA3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFT1Q96AA3 AC138969.2-201ENST00000532739 9932 ntBASIC14.52□□□□□ -0.08
RFT1Q96AA3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFT1Q96AA3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 FOSL1P1-201ENST00000511041 816 ntBASIC14.52□□□□□ -0.09
RFT1Q96AA3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.52□□□□□ -0.09
RFT1Q96AA3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms