Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.54■□□□□ 0.24
CDKL2Q92772 IFNL4P1-201ENST00000607083 540 ntBASIC16.54■□□□□ 0.24
CDKL2Q92772 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CDKL2Q92772 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CDKL2Q92772 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.54■□□□□ 0.24
CDKL2Q92772 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL2Q92772 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL2Q92772 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.54■□□□□ 0.24
CDKL2Q92772 AC112504.1-201ENST00000623415 1841 ntBASIC16.54■□□□□ 0.24
CDKL2Q92772 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.54■□□□□ 0.24
CDKL2Q92772 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDKL2Q92772 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL2Q92772 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL2Q92772 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.54■□□□□ 0.24
CDKL2Q92772 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL2Q92772 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL2Q92772 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDKL2Q92772 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDKL2Q92772 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 AC069224.1-201ENST00000566372 1715 ntBASIC16.53■□□□□ 0.24
CDKL2Q92772 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.53■□□□□ 0.24
CDKL2Q92772 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL2Q92772 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL2Q92772 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CDKL2Q92772 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDKL2Q92772 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDKL2Q92772 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDKL2Q92772 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CDKL2Q92772 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDKL2Q92772 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDKL2Q92772 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDKL2Q92772 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL2Q92772 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDKL2Q92772 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL2Q92772 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.53■□□□□ 0.24
CDKL2Q92772 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.53■□□□□ 0.24
CDKL2Q92772 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDKL2Q92772 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL2Q92772 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CDKL2Q92772 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDKL2Q92772 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL2Q92772 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDKL2Q92772 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL2Q92772 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.52■□□□□ 0.24
CDKL2Q92772 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKL2Q92772 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL2Q92772 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.52■□□□□ 0.24
CDKL2Q92772 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.52■□□□□ 0.24
CDKL2Q92772 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.52■□□□□ 0.24
CDKL2Q92772 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.52■□□□□ 0.24
CDKL2Q92772 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CDKL2Q92772 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.52■□□□□ 0.24
CDKL2Q92772 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.52■□□□□ 0.24
CDKL2Q92772 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL2Q92772 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDKL2Q92772 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDKL2Q92772 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL2Q92772 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL2Q92772 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.52■□□□□ 0.23
CDKL2Q92772 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.52■□□□□ 0.23
CDKL2Q92772 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL2Q92772 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL2Q92772 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDKL2Q92772 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CDKL2Q92772 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDKL2Q92772 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL2Q92772 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL2Q92772 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL2Q92772 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDKL2Q92772 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDKL2Q92772 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDKL2Q92772 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKL2Q92772 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CDKL2Q92772 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL2Q92772 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKL2Q92772 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.51■□□□□ 0.23
CDKL2Q92772 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKL2Q92772 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.51■□□□□ 0.23
CDKL2Q92772 MIR3909-201ENST00000579518 119 ntBASIC16.51■□□□□ 0.23
CDKL2Q92772 CLEC4GP1-201ENST00000596555 870 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms