Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 POM121L3P-201ENST00000419331 1163 ntBASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 AC131009.4-201ENST00000624048 1740 ntBASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 NSUN5P1-202ENST00000421140 1535 ntBASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 NSUN5P2-203ENST00000457352 1529 ntBASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB3IL1Q8TBN0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 KRT17P6-201ENST00000453795 1220 ntBASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 FAM86EP-206ENST00000510506 987 ntBASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 AC020765.3-201ENST00000613051 740 ntBASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB3IL1Q8TBN0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB3IL1Q8TBN0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB3IL1Q8TBN0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB3IL1Q8TBN0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RAB3IL1Q8TBN0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
RAB3IL1Q8TBN0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
RAB3IL1Q8TBN0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB3IL1Q8TBN0 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
RAB3IL1Q8TBN0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 PCED1CP-201ENST00000419887 785 ntBASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 DRAXINP1-201ENST00000437611 948 ntBASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB3IL1Q8TBN0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms