Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 AP002490.2-201ENST00000524791 560 ntBASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 AL079307.3-201ENST00000556114 283 ntBASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 AC025048.6-201ENST00000634326 1161 ntBASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.11■□□□□ 0.33
SHKBP1Q8TBC3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SHKBP1Q8TBC3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 AC027307.3-201ENST00000594262 1100 ntBASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHKBP1Q8TBC3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms